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tagwiki:tools:io [2017/08/06 14:32] funkyfinwhale [Tag specific import tools] |
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| + | <page-header> | ||
| + | ====== Import & Export Tools ====== | ||
| + | Here you can find information and links to import tag / manufacturer specific data formats into a common NetCDF data storage structure. | ||
| + | </page-header> | ||
| + | |||
| + | <WRAP center round important 97.5%> | ||
| + | The Animal Tag Tools Team is working hard to populate the individual web pages for the Import Tools. They will be available shortly. Please revisit this page at a later date. | ||
| + | </WRAP> | ||
| + | |||
| + | ===== General import & export tools===== | ||
| + | |<100% 12.5% - 5% 5% 5% 7.5%>| | ||
| + | ^Function^Description^Matlab^Octave^R^Other^ | ||
| + | | [[:tagwiki:tools:io:change_fnames|change_fnames]] | Change the names of files in a directory. | ✔ | ✔ | ✔ | ✘ | | ||
| + | | [[:tagwiki:tools:io:csv2struct|csv2struct]] | Read a CSV metadata file and convert it into a metadata structure. | ✔ | ✔ | ✔ | ✘| | ||
| + | | [[:tagwiki:tools:io:read_csv|read_csv]] | Read data from CSV file. | ✔ | ✔ | ✔ | ✘| | ||
| + | | [[:tagwiki:tools:io:sens_struct|sens_struct]] |Generate a sensor structure from a sensor data vector or matrix.| ✔ | ✔ | ✔ | ✘| | ||
| + | | [[:tagwiki:tools:io:sens2var|sens2var]] |Extract data from a sensor structure. | ✔ | ✔ | ✔ | ✘| | ||
| + | | [[:tagwiki:tools:io:sensor_names|sensor_names.csv]] |Table of sensor names, definitions & labels for use with the Import tools| ✔ | ✔ | ✔ | ✘| | ||
| + | | [[:tagwiki:tools:io:strip_quotes|strip_quotes]] |Remove bracketing double quotes from string or cell array containing strings.| ✔ | ✔ | ✔ | ✘| | ||
| + | |||
| + | ===== NetCDF import & export tools ===== | ||
| + | |<100% 12.5% - 5% 5% 5% 5%>| | ||
| + | ^Function^Description^Matlab^Octave^R^Other^ | ||
| + | | [[:tagwiki:tools:io:add_nc|add_nc]] | Add a variable to a NetCDF archive file.| ✔ | ✔ | ✔ | ✘| | ||
| + | | [[:tagwiki:tools:io:load_nc|load_nc]] | Load variables from a NetCDF archive file.| ✔ | ✔ | ✔ | ✘| | ||
| + | | [[:tagwiki:tools:io:save_nc|save_nc]] |Save one or more variables to a NetCDF archive file.| ✔ | ✔ | ✔ | ✘| | ||
| + | |||
| + | ===== Tag specific import tools ===== | ||
| + | Several Tag Manufacturer's and End Users have kindly offered the Tag Tools team datasets for use in the Tag Tools Workshops. The Tag Tools team has been working hard to develop readers, translaters or wrapper functions for different tag output formats. All reader functions output data into a common NetCDF data storage structure. | ||
| + | |||
| + | |<100% - 12.5% 12.5% - 5% 5% 5% 5%>| | ||
| + | ^ Manufacturer ^ Tag ^ Function ^ Description ^ Matlab ^ Octave ^ R ^ Other ^ | ||
| + | | [[http://www.greeneridge.com/en/|Greeneridge Sciences, Inc.]] | Acousonde | read_acousonde | Read in Acousonde data | Under development, coming soon! |||| | ||
| + | | [[http://www.cats.is/|CATS]] | CATS | [[:tagwiki:tools:io:read_cats|read_cats]] |Read data files from a CATS data Logger. This function generates a netCDF file.| ✔ | ✔ | Under development, coming soon!|| | ||
| + | | ::: | :::| [[:tagwiki:tools:io:read_cats_csv|read_cats_csv]] |Read a CSV file with sensor data from a CATS tag.| ✔ | ✔ | Under development, coming soon!|| | ||
| + | | [[http://www.wildbyte-technologies.com/|Wildbyte Technologies]] | DailyDiary | [[:tagwiki:tools:io:read_dd|read_dd]] |Read in Daily Diary data| ✔ | ✔ | Under development, coming soon!|| | ||
| + | | [[http://wildlifecomputers.com/| Wildlife Computers]] | TDR-MK10DD | [[:tagwiki:tools:io:read_tdr10dd_csv|read_tdr10dd_csv]] |Read in TDR-MK10 Daily Diary data| ✔ | ✔ | Under development, coming soon!|| | ||
| + | |[[https://www.soundtags.org/|Sound & Movement Tags]]| DTag | read_d3 | Read in DTag data | Under development, coming soon!|||| | ||
| + | |[[http://l-leo.com/eng/|Little Leonardo]]| 3MPD3GT | [[:tagwiki:tools:io:readll3m|read_ll3m ]] | Read in data from Little Leonardo 3MPD3GT| ✔ | ✔ | Under development, coming soon!|| | ||
| + | |[[http://www.loggerhead.com/|Loggerhead Instruments]]| OpenTag | readOpen | Read in data from OpenTags| Under development, coming soon!|||| | ||
| + | |||
| + | ===== Conversion tools TOC ===== | ||
| + | |||
| + | Tools for converting between one manufacturer's tag from to anothers. | ||
| + | ^ Tag ^ Function ^ Description ^ Matlab ^ Octave ^ R ^ Other ^ | ||
| + | | Little Leonardo | ll3m2dtag | Convert backwards & forwards between Little Leonardo 3MPD3GT sensor frame and DTag sensor frame T| Under development, coming soon|||| | ||
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