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tagwiki:datasets [2017/12/08 15:21]
funkyfinwhale [Other Test data sets]
tagwiki:datasets [2017/12/08 15:29] (current)
funkyfinwhale [Tag Tools Test data sets]
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 +<​page-header>​
 +====== Example Datasets ======
 +</​page-header>​
 +===== License & Citation information =====
 +The example data sets made available through this site, have kindly been provided by a number of different people, research groups and tag manufacturers. The datasets have been made available for tool testing & educational purposes. Contact & citation information can be found in the ***nc** file format through the info (metadata) data structure, and links to data providers are available in the tables below. If you intend to use the data for any other purposes please could you contact the data providers directly to discuss this use.   
  
 +===== Downloads =====
 +Download **all** the example datasets in a **zipped folder** by following this link: {{ :​tagwiki:​datasets:​tagtools_datasets_20171208.zip |Download Complete Test Datasets (89,​412KB)}} or download individual example datasets by following the links in the tables below. Descriptions of the individual datasets can be found in the **README_testdata.txt** file in the zipped folder **tagtools_datasets_20171208.zip ** or in the tables below.
 +
 +==== Tag Tools Test data sets ====
 +The three Tag Tools test data sets, below, were generated from DTag sensor data stored in a Matlab ***.mat** file format & DTag metadata stored in a ***.csv** file format using scripts written in the Matlab scripting language. For example **test_set2.nc** was generated from the following files; {{:​tagwiki:​datasets:/​testset2.mat|test_set2.mat (1,045KB)}} & {{:​tagwiki:​datasets:/​testset2.csv|test_set2.csv (2KB)}} using the function {{:​tagwiki:​datasets:/​make_test_set2.m|make_test_set2.m (1KB)}} using the [[tagwiki:​tools:​io|Import & Export Tools]].
 +
 +
 +{{ :​tagwiki:​tools_20171005:​toolbox:​20171005_matlab_octave_tagtools.zip| Matlab and Octave Tag Tools}}
 +|<100% 1% 12.5% 32% 7.5% 7.5% 7.5% 32%>|
 +^  ID  ^Dataset ​ ^Description ​ ^  Format ​ ^  Size (KB)  ^Tag Type  ^Provider ​ ^
 +
 +|  1  |{{ :​tagwiki:​datasets:​testset1.nc|testset1.nc}} |DTAG3 data from a deployment on a Blainville'​s beaked whale in El Hierro, Canary Islands, Spain| ​ netcdf ​ |  7,579  |DTag-v3 ​ |Mark Johnson (University of St. Andrews) & Natacha Aguilar de Soto (Universidad La Laguna) |
 +|  2  |{{ :​tagwiki:​datasets:​testset2.nc|testset2.nc}}|DTAG4-Seal data from a deployment on a Harbour Seal tagged in Husum, Germany. |  netcdf ​ |  1,086  |DTag-v4S |Mark Johnson, [[http://​soundtags.org/​| Sound & Movement Tags]], SMRU, SOI, University of St. Andrews|
 +|  3  |{{ :​tagwiki:​datasets:​testset3.nc|testset3.nc}}|DTAG2 data from a deployment on a sperm whale in the northern Gulf of Mexico. |  netcdf ​ |  27,​432 ​ |DTag-v2 ​ |Mark Johnson,​[[http://​soundtags.org/​| Sound & Movement Tags]], SMRU, SOI, University of St. Andrews|
 +
 +==== Other Test data sets====
 +|<100% 1% 12.5% 32% 7.5% 7.5% 7.5% 32%>|
 +
 +
 +
 +^  ID  ^Dataset ​ ^Description ​ ^  Format ​ ^  Size (KB)  ^Tag Type  ^Provider ​ ^
 +|  a  |{{:​tagwiki:​datasets:​cats_test_segment.csv|cats_test_segment.csv}}|Test segment of raw csv data from a bench test of a CATS CAM tag. To import the data in Matlab, Octave or R refer to [[:​tagwiki:​tools:​io:​read_cats|read_cats]] function help  |  csv  |  10  |CATS CAM |David Cade, {{http://​goldbogen.stanford.edu/​| Goldbogen Lab}}, Hopkins Marine Station, Stanford University ​ |
 +|  b  |{{:​tagwiki:​datasets:​ct16_207a_raw.nc|ct16_207a_raw.nc}} ​ |Test segment of raw data from a bench test of a CATS CAM tag in Tag Tools nc format, generated from the {{:​tagwiki:​datasets:​cats_test_segment.csv|cats_test_segment.csv}} file using [[:​tagwiki:​tools:​io:​read_cats|read_cats]]. To import the data in to Matlab, R or Octave refer to [[:​tagwiki:​tools:​io:​load_nc|load_nc]] function help.  |  netcdf ​ |  55  |CATS CAM  |David Cade, {{http://​goldbogen.stanford.edu/​| Goldbogen Lab}}, Hopkins Marine Station, Stanford University ​ |
 +|  c  |{{:​tagwiki:​datasets:​mn12_186a_raw.zip|mn12_186a_raw.zip}} ​ | Little Leonardo 3MPD3GT data from a humpback whale in the Gulf of St. Lawrence in Tag Tools nc format. The file was generated using the [[:​tagwiki:​tools:​io:​readll3m|read_ll3m ]] function and has been zipped to improve portability. To import the data, first download and unzip it, and then use  the function [[:​tagwiki:​tools:​io:​load_nc|load_nc]] to import it into Matlab, R or Octave. ​ |  zip(netcdf) ​ |  3,826  |LL-3MPD3GT ​ |RenĂ© Swift, {{http://​soundtags.org/​| Sound & Movement Tags}}, SMRU, SOI, University of St. Andrews ​ |
 +|  d  |{{:​tagwiki:​datasets:​mn16_212a_raw.zip|mn16_212a_raw.zip}} ​ |CATS CAM data from a humpback whale tagged in Montery Bay in Tag Tools nc format. The file was  generated ​ using the  [[:​tagwiki:​tools:​io:​read_cats|read_cats]] function and has been zipped to improve portability. To import the data, first download and unzip it, and then use the function [[:​tagwiki:​tools:​io:​load_nc|load_nc]] to import it into Matlab, R or Octave. |  zip(netcdf) ​ |  52,​047 ​ |  CATS CAM  |David Cade, {{http://​goldbogen.stanford.edu/​| Goldbogen Lab}}, Hopkins Marine Station, Stanford University ​ |
 +|  e  |{{:​tagwiki:​datasets:​oa14_319a_raw.zip|oa14_319a_raw.zip}} ​ |Wildbytes Daily Diary data from a sheep in Tag Tools nc format. The file was  generated ​ using the  [[:​tagwiki:​tools:​io:​read_cats|read_dd]] function and has been zipped to improve portability. To import the data, first download and unzip it, and then use the function [[:​tagwiki:​tools:​io:​load_nc|load_nc]] to import it into Matlab, R or Octave. ​ |  zip(netcdf) ​ |  7,068  |WB DD  |Lic. di Virgilio Agustina y Juan Morales,​{{https://​sites.google.com/​site/​laboratorioecotono/​|Laboratorio ECOTONO}}, Argentina ​ |
 +|  f  |{{:​tagwiki:​datasets:​tdr10dd_test_segment.csv|tdr10dd_test_segment.csv}} ​ |A section of raw Wildlife Computers MK10 TDR Daily Diary data from a Northern Fur Seal in csv format. To import the data into R, Octave or Matlab refer to [[:​tagwiki:​tools:​io:​read_cats|read_dd]] function help.  |  csv  |  97  |  WC TDR-MK10DD ​ | {{https://​wildlifecomputers.com/​|Wildlife Computers}} ​ |
  • tagwiki/datasets.txt
  • Last modified: 2017/12/08 15:29
  • by funkyfinwhale